TY - JOUR
T1 - Genetic Identification and Molecular Modeling Characterization Reveal a Novel PROM1 Mutation in Stargardt4-like Macular Dystrophy
AU - Imani, Saber
AU - Cheng, Jingliang
AU - Shasaltaneh, Marzieh D
AU - Wei, Chunli
AU - Yang, Lisha
AU - Fu, Shangyi
AU - Zou, Hui
AU - Khan, Md. Asaduzzaman
AU - Zhang, Xianqin
AU - Chen, Hanchun
AU - Zhang, Dianzheng
AU - Duan, Chengxia
AU - Lv, Hongbin
AU - Li, Yumei
AU - Chen, Rui
AU - Fu, Junjiang
PY - 2017/1/1
Y1 - 2017/1/1
N2 - Stargardt disease-4 (STGD4) is an autosomal dominant complex, genetically heterogeneous macular degeneration/dystrophy (MD) disorder. In this paper, we used targeted next generation sequencing and multiple molecular dynamics analyses to identify and characterize a disease-causing genetic variant in four generations of a Chinese family with STGD4-like MD. We found a novel heterozygous missense mutation, c.734T>C (p.L245P) in the PROM1 gene. Structurally, this mutation most likely impairs PROM1 protein stability, flexibility, and amino acid interaction network after changing the amino acid residue Leucine into Proline in the basic helix-loop-helix leucine zipper domain. Molecular dynamic simulation and principal component analysis provide compelling evidence that this PROM1 mutation contributes to disease causativeness or susceptibility variants in patients with STGD4-like MD. Thus, this finding defines new approaches in genetic characterization, accurate diagnosis, and prevention of STGD4-like MD.
AB - Stargardt disease-4 (STGD4) is an autosomal dominant complex, genetically heterogeneous macular degeneration/dystrophy (MD) disorder. In this paper, we used targeted next generation sequencing and multiple molecular dynamics analyses to identify and characterize a disease-causing genetic variant in four generations of a Chinese family with STGD4-like MD. We found a novel heterozygous missense mutation, c.734T>C (p.L245P) in the PROM1 gene. Structurally, this mutation most likely impairs PROM1 protein stability, flexibility, and amino acid interaction network after changing the amino acid residue Leucine into Proline in the basic helix-loop-helix leucine zipper domain. Molecular dynamic simulation and principal component analysis provide compelling evidence that this PROM1 mutation contributes to disease causativeness or susceptibility variants in patients with STGD4-like MD. Thus, this finding defines new approaches in genetic characterization, accurate diagnosis, and prevention of STGD4-like MD.
KW - stargardt disease-4 (STGD4)
KW - next generation sequencing
KW - PROM1
KW - missense mutation
KW - molecular modeling
UR - https://digitalcommons.pcom.edu/scholarly_papers/1899
M3 - Article
VL - 9
JO - Oncotarget
JF - Oncotarget
ER -