Prediction and phylogenetic analysis of mammalian short interspersed elements (SINEs).

I. B. Rogozin; V. I. Mayorov; M. V. Lavrentieva; L. Milanesi; L. R. Adkison

doi:10.1093/bib/1.3.260

Prediction and phylogenetic analysis of mammalian short interspersed elements (SINEs).

I. B. Rogozin, V. I. Mayorov, M. V. Lavrentieva, L. Milanesi, L. R. Adkison

Research output: Contribution to journal › Review article › peer-review

Abstract

The presence of repetitive elements can create serious problems for sequence analysis, especially in the case of homology searches in nucleotide sequence databases. Repetitive elements should be treated carefully by using special programs and databases. In this paper, various aspects of SINE (short interspersed repetitive element) identification, analysis and evolution are discussed.

Original language	English
Pages (from-to)	260-274
Number of pages	15
Journal	Briefings in bioinformatics
Volume	1
Issue number	3
DOIs	https://doi.org/10.1093/bib/1.3.260
State	Published - 2000
Externally published	Yes

ASJC Scopus Subject Areas

Information Systems
Molecular Biology

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title = "Prediction and phylogenetic analysis of mammalian short interspersed elements (SINEs).",

abstract = "The presence of repetitive elements can create serious problems for sequence analysis, especially in the case of homology searches in nucleotide sequence databases. Repetitive elements should be treated carefully by using special programs and databases. In this paper, various aspects of SINE (short interspersed repetitive element) identification, analysis and evolution are discussed.",

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AU - Milanesi, L.

AU - Adkison, L. R.

PY - 2000

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AB - The presence of repetitive elements can create serious problems for sequence analysis, especially in the case of homology searches in nucleotide sequence databases. Repetitive elements should be treated carefully by using special programs and databases. In this paper, various aspects of SINE (short interspersed repetitive element) identification, analysis and evolution are discussed.

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Prediction and phylogenetic analysis of mammalian short interspersed elements (SINEs).

Abstract

ASJC Scopus Subject Areas

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